Chronology : Post Atlantis Attacks to Acts of Vengeance

[Frank]

Thor 409
Thor 410-BTS (Captain America THOR She hulk Acts of Vengeance Prologue)
Sensational She hulk 10-11
Amazing Spider-Man 320
Spectacular Spider-Man 154
Web of Spider-Man 55
Amazing Spider-Man 321-325
X-23: TARGET 2-Flashback Captain America Nick fury (not sure)
Marvel Comics Presents 34/4 (Captain America)
Captain America 358-362
Marvel Super Heroes v3 6-8
Excalibur 9-10
Excalibur 11 [Pages 01-17]
Excalibur SE #02 (Mojo Mayhem)
Excalibur 20
Excalibur 26
Excalibur 11[Pages 18-21]
Marvel Comics Presents 17/4
Marvel Comics Presents 18-24
Marvel Comics Presents 19-24
Marvel Comics Presents 24/4
Marvel Comics Presents 25
Marvel Comics Presents 26/4
Marvel Comics Presents 27-31
Havok & Wolverine Meltdown 1-4
Marvel Comics Presents 40-Flashback
Marvel Comics Presents 38/4
Marvel Comics Presents 39-47
Marvel Comics Presents 48/4
Marvel Comics Presents 51
Marvel Comics Presents 52
Marvel Comics Presents 53
Wolverine Jungle Adventure-FB-FB
Wolverine Jungle Adventure -Flashback
Wolverine v2 17-Flashback
Wolverine v2 17-18
Captain America 363 (Pages 1 - 5) (Wolverine)
Avengers Spotlight 26 Acts of Vengeance begins (Captain America)
Dr Strange Sorcerer Supreme 5-9
Marvel Comics Presents 44/3 (Dr Strange)
Dr Strange Sorcerer Supreme 10 (Dr Strange)
Iron Man 249-250
Fury 1 (Iron Man) (not sure)
Alpha Flight 77
Damage Control v2 1 Acts of Vengeance (Captain America Thor Iron Man)
Captain America 363 (Pages 6 - 17) (Wolverine)
Marc Spector Moon Knight 4-5 (Black Cat)
Spectacular Spider-Man 155-156 (Black Cat)
Web of Spider-Man 56-57
Web of Spider-Man 57
Spectacular Spider-Man 157
Web of Spider-Man 58
Amazing Spider-Man, Parallel Lives
Amazing Spider-Man 326 Acts of Vengeance
Incredible Hulk v2 362
Marvel Comics Presents 78/4 (Hulk)
Incredible Hulk v2 363 Acts of Vengeance
Marvel Comics Presents 39/4 (Spider-Man)
Spectacular Spider-Man 158
Web of Spider-Man 59 Acts of Vengeance
Dr Strange Sorcerer Supreme 11 Acts of Vengeance
Captain America 364
Marvel Comics Presents 33/4 (Submariner)
Captain America 365 (Pages 1 - 9) (Quasar Submariner)
Fantastic Four 334 Acts of Vengeance (Captain America Thing Mr Fantastic Thor)
Dr Strange Sorcerer Supreme 12 Acts of Vengeance
Alpha Flight 78 Acts of Vengeance
Amazing Spider-Man 327 Acts of Vengeance
Power Pack 53 Acts of Vengeance
Quasar 5 Acts of Vengeance (Pages 1 - 11) (Captain America)
Avengers Annual 19/3 (Page 4:4 - 4:5)-Flashback (Captain America Thor She Hulk)
Quasar 5 Acts of Vengeance (Pages 12 - 22) (Captain America)
Avengers Spotlight 26/2 (Iron man Hawkeye)
Avengers Spotlight 27 Acts of Vengeance Hawkeye
Iron Man 251-252 Acts of Vengeance
Captain America 365 Acts of Vengeance (Pages 10 - 17) (Submariner)
Avengers West Coast 53 (Iron Man) Acts of Vengeance
Punisher Annual 2/3 (Pages 3 - 6)-Flashback
Punisher Annual 2/3
Punisher War Journal 8-9 (Daredevil)
Punisher v2 24-25
Punisher Annual 3
Punisher Annual 3/2 (2 - 4)-Flashback
Punisher Annual 3/2 (6)-Flashback
Punisher Annual 3/2
Epic Graphic Novel: Punisher: Return To Big Nothing (1989)
Punisher War Journal 10
Punisher v2 26-27
Punisher War Journal 11 ~ Punisher War Journal 11/2
Classic Punisher/3
MARVEL Graphic Novel: Punisher: Intruder (1989)
Daredevil Annual 6 (Pages 1 - 15:3)
Daredevil Annual 6 (15:4 - 15:6) ~ Daredevil Annual 6/3
Daredevil Annual 6 (15:7)
Daredevil Annual 6/2
Daredevil Annual 6 (16 - 25)
Incredible Hulk v2 16-Flashback (Ben Urich Daredevil)
Daredevil 271-274
Marc Spector Moon Knight 6-7
Marc Spector Moon Knight 8-9 Acts of Vengeance
Spectacular Spider-Man 159 Acts of Vengeance
Quasar 6 Acts of Vengeance
Daredevil 275-276 act of vengeance
Punisher 28 Acts of Vengeance
New Mutants 77-80 Acts of Vengeance
New Mutants 82-85 Acts of Vengeance
X-Men Unlimited v2 9 (1:5)-Flashback (Colossus)
X-Men Unlimited v2 9 (2:4)-Flashback (Colossus)
X-Men Unlimited v2 9-Flashback (Colossus)
Uncanny X-Men 246-248
Uncanny X-Men 267 (9:7 - 10&11:5)-Flashback (Storm)
Uncanny X-Men 249-Flashback
Wolverine v2 19-20 Acts of Vengeance
Wolverine v2 21
Uncanny X-Men 249-250
Wolverine v2 22-23
Uncanny X-Men 251-Flashback
Uncanny X-Men 250
Marvel Super Heroes #14 (Speedball) Acts of Vengeance
New Mutants 86 Acts of Vengeance
New Mutants 87-92
Captain America 366 Acts of Vengeance (Pages1 - 4) (Submariner)
New Warriors 1 Acts of Vengeance (Captain America Quasar She Hulk)
Thor 411 (Pages 1 - 6:3) Acts of Vengeance
Thor 411 (page 6:4 - 6:5) ~ Captain America 366 (Pages 5 - 7) (Thor) [All one battle sequence]
Thor 411 (6:6 - 17 ) Acts of Vengeance [Continuation of same battle]
Thor 412 Acts of Vengeance (NightTrasher) [Follows on immediately] X-Factor 43-48
X-Factor 49-50 (appearance of Loki) Acts of Vengeance [Loki appears here after the Thor/Juggernaut battle]
X-Factor 50/2
X-Factor 51 (Pages 1 - 29)
Captain America 366 (Pages 8-16) Acts of Vengeance [Some unspecified time shortly after the Thor/Juggy battle - Hank & Fabian have been working for "hours"]
X-Factor 51 (Pages 30 - 34) [Celebrations thru the night after the victory; X-Factor begin their flight back to Earth] Avengers Annual 19/3-Flashback (Quasar Thor She hulk)
Avengers Annual 19/3 (7:3)-Flashback-BTS (Captain America)
Mutant Misadventures Of Cloak And Dagger 9 (Captain America Thor She Hulk)
Avengers 312 (Captain America Kingpin) Acts of Vengeance
Cloak and Dagger 8-9 (Iron Man) Acts of Vengeance
X-Men v2 32-Flashback
Uncanny X-Men 252-255
X-Men Forever 2
Uncanny X-Men 256-258 (apparition of Mandarin) Acts of Vengeance
Web of Spider-Man 60 Acts of Vengeance
Doctor Srange Sorcerer Supreme 13 Acts of Vengeance
Marc Spector Moon Knight 10 Acts of Vengeance
Marc Spector Moon Knight 11-14
Amazing Spider-Man 328 (Hulk) Acts of Vengeance
Avengers Spotlight 28 (Hawkeye) Acts of Vengeance
Avengers West Coast 5/5 (Hawkeye)
Spectacular Spider-Man 160 Acts of Vengeance
Web of Spider-Man 61 Acts of Vengeance
Alpha Flight 80 Acts of Vengeance
Captain America 367 Acts of Vengeance (Captain America Submariner)
Captain America 365-367 (Cobra) Acts of Vengeance
Marvel Graphic Novel :Rick Mason The Agent (1989) (Nick Fury)
Nick Fury Agent of Shield v3 7 (Pages 2 - 23) (Nick Fury)
Nick Fury Agent of Shield v3 8
Punisher 29 (Nick Fury Submariner Thor Kingpin) Acts of
Damage Control v2 2 (Captain America Punisher She hulk) Acts of Vengeance
Punisher War Journal #12-13 (Kingpin) Acts of Vengeance
Damage Control #3 (Nick fury She hulk) Acts of Vengeance
Avengers Spotlight 29 (Hawkeye) (not sure)
Avengers West Coast 54 (Captain America Quasar Iron man Hawkeye) Acts of Vengeance
Avengers 313 (Hawkeye Kingpin) Acts of Vengeance
Fantastic Four 335-336 (Thing Mr Fantastic) Acts of Vengeance
Captain America 368
Doctor Strange Sorcerer Supreme 14-16
Doctor Strange Sorcerer Supreme 16/2
Doctor Strange Sorcerer Supreme 16
Doctor Strange Sorcerer Supreme 17-19
Thor 413 (Dr Strange) Acts of Vengeance
Avengers West Coast 55 (Captain America THOR Iron man Hawkeye Kingpin) Acts of Vengeance
Avengers West Coast 56-62 (Iron Man Hawkeye) Acts of Vengeance
Avengers Annual 19 Acts of Vengeance
Avengers Annual 19/3 (11:1 - 11:2)-Flashback (Captain America SUBMARINER THOR Iron man Hawkeye)
T hor 414
Avengers Spotlight 29 Acts of Vengeance
Avengers Spotlight 29/2 (Thing Quasar Iron Man Hawkeye)
Damage Control v2 4 (Nick fury Thor Kingpin Punisher) Acts of Vengeance
Punisher v2 30 -32
Avengers Annual 19/3 (Captain America Thor)
Captain America 369
Captain America 370 (Thor)
Captain America 371
Quasar 7 (Spider-Man) Acts of Vengeance
Amazing Spider-Man 329 Acts of Vengeance

[StrayLamb]

NW 1 Acts of Vengeance (Captain America Quasar She Hulk)
T 411 Acts of Vengeance (1 - 6:3)
T 411 Acts of Vengeance (6:4 - 6:5) ~ CA 366 (5) (Thor)
CA 366 (5 -6) (Captain America Submariner) Acts of Vengeance
CA 366 (6 - 7) (Thor) Acts of Vengeance
CA 366 (8-16) Acts of Vengeance
T 411 (7 - 17 )Acts of Vengeance
T 412 Acts of Vengeance (NightTrasher)

As per Loki's chronology and other factors, this most likely occurs in the following sequence..

NW 1 Acts of Vengeance (Captain America Quasar She Hulk)
T 411 (1 - 6:3) Acts of Vengeance
T 411 (6:4 - 6:5) ~ CA 366 (5 - 7) (Thor) [All one battle sequence]
T 411 (6:6 - 17 ) Acts of Vengeance [Continuation of same battle]
T 412 Acts of Vengeance (NightTrasher) [Follows on immediately]
XF 49-50 (49-50 appearance of Loki) Acts of Vengeance [Loki appears here after the Thor/Juggernaut battle]
XF 50/2
XF 51 (1 - 29)
CA 366 (8-16) Acts of Vengeance [Some unspecified time shortly after the Thor/Juggy battle - Hank & Fabian have been working for "hours"]
XF 51 (30 - 34) [Celebrations thru the night after the victory; X-Factor begin their flight back to Earth]

[Frank]

thank you Straylamb it's edited